Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| family 2 glycosyl transferase | A5893_05810 | Not Available | Negative | 1468621 - 1469607 | 38714.0 |
| glycosyl transferase | A5893_05815 | Not Available | Negative | 1469607 - 1470485 | 34777.4 |
| transporter | A5893_05820 | Not Available | Positive | 1470563 - 1471447 | 32782.2 |
| x-pro aminopeptidase | A5893_05825 | Not Available | Negative | 1471434 - 1472723 | 49766.3 |
| flagellar motor protein motb | A5893_05830 | Not Available | Positive | 1472880 - 1474322 | 51390.0 |
| reactive intermediate/imine deaminase | A5893_05835 | Not Available | Positive | 1474540 - 1474920 | 13889.7 |
| permease | A5893_05840 | Not Available | Positive | 1474920 - 1475855 | 35448.9 |
| atp-dependent dna helicase recg | A5893_05845 | Not Available | Positive | 1475848 - 1477953 | 80439.3 |
| peptidase m28 | A5893_05850 | Not Available | Positive | 1477996 - 1479390 | 51236.5 |
| mfs transporter | A5893_05855 | Not Available | Positive | 1479398 - 1480666 | 46153.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
