Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gxxexxy protein | A5893_05760 | Not Available | Positive | 1456259 - 1456639 | 14437.1 |
| dna topoisomerase iv | A5893_05765 | Not Available | Positive | 1456950 - 1459727 | 105319.0 |
| sam-dependent methyltransferase | A5893_05770 | Not Available | Negative | 1459760 - 1460545 | 30028.5 |
| hypothetical protein | A5893_05775 | Not Available | Positive | 1460755 - 1461612 | 32931.6 |
| 1,4-beta-xylanase | A5893_05780 | Not Available | Negative | 1461695 - 1462609 | 33764.6 |
| peptide chain release factor 2 | A5893_05785 | Not Available | Negative | 1462646 - 1463500 | 32058.9 |
| hypothetical protein | A5893_05790 | Not Available | Negative | 1464009 - 1464596 | 22575.0 |
| hypothetical protein | A5893_05795 | Not Available | Negative | 1464605 - 1465540 | 36500.2 |
| antibiotic abc transporter atp-binding protein | A5893_05800 | Not Available | Negative | 1465543 - 1467384 | 68545.6 |
| hypothetical protein | A5893_05805 | Not Available | Negative | 1467413 - 1468537 | 43720.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
