Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_05710 | Not Available | Negative | 1443601 - 1444329 | 27928.0 |
| tail-specific protease | A5893_05715 | Not Available | Positive | 1444562 - 1446637 | 77576.4 |
| amidase | A5893_05720 | Not Available | Positive | 1446764 - 1448401 | 58643.7 |
| magnesium chelatase | A5893_05725 | Not Available | Positive | 1448500 - 1450041 | 56363.4 |
| peptide-methionine (s)-s-oxide reductase | A5893_05730 | Not Available | Positive | 1450310 - 1450987 | 24861.5 |
| hypothetical protein | A5893_05735 | Not Available | Positive | 1451088 - 1451339 | 9682.69 |
| prephenate dehydrogenase | A5893_05740 | Not Available | Positive | 1451400 - 1452653 | 46953.3 |
| hypothetical protein | A5893_05745 | Not Available | Positive | 1452678 - 1453148 | 17742.9 |
| dna topoisomerase iv | A5893_05750 | Not Available | Positive | 1453561 - 1455465 | 71894.4 |
| cytidine deaminase | A5893_05755 | Not Available | Positive | 1455692 - 1456183 | 18107.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
