Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | A5893_05660 | Not Available | Negative | 1433755 - 1434534 | 28498.6 |
| hypothetical protein | A5893_05665 | Not Available | Positive | 1434647 - 1435291 | 23827.9 |
| hypothetical protein | A5893_05670 | Not Available | Negative | 1435352 - 1435801 | 16960.1 |
| type i methionyl aminopeptidase | A5893_05675 | Not Available | Negative | 1435905 - 1436669 | 28249.9 |
| 2-dehydro-3-deoxygluconokinase | A5893_05680 | Not Available | Negative | 1436880 - 1437905 | 36868.4 |
| ketohydroxyglutarate aldolase | A5893_05685 | Not Available | Positive | 1438115 - 1438774 | 23960.3 |
| mfs transporter | A5893_05690 | Not Available | Positive | 1438781 - 1440223 | 53220.1 |
| hypothetical protein | A5893_05695 | Not Available | Positive | 1440527 - 1441489 | 36935.5 |
| oligo-1,6-glucosidase | A5893_05700 | Not Available | Positive | 1441550 - 1443223 | 65201.1 |
| hypothetical protein | A5893_05705 | Not Available | Positive | 1443227 - 1443604 | 14389.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
