Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_05605 | Not Available | Positive | 1423519 - 1424211 | 25414.2 |
| hypothetical protein | A5893_05610 | Not Available | Positive | 1424269 - 1425321 | 41599.0 |
| glycoside hydrolase | A5893_05615 | Not Available | Negative | 1425331 - 1426875 | 59519.2 |
| mechanosensitive ion channel protein mscs | A5893_05625 | Not Available | Negative | 1428104 - 1429246 | 43267.7 |
| 50s ribosomal protein l19 | A5893_05630 | Not Available | Negative | 1429341 - 1429688 | 13064.0 |
| trna (guanosine(37)-n1)-methyltransferase trmd | A5893_05635 | Not Available | Negative | 1429828 - 1430502 | 24952.9 |
| 16s rrna processing protein rimm | A5893_05640 | Not Available | Negative | 1430761 - 1431279 | 20217.8 |
| hypothetical protein | A5893_05645 | Not Available | Negative | 1431302 - 1431673 | 14085.1 |
| hypothetical protein | A5893_05650 | Not Available | Negative | 1431679 - 1431912 | 9027.79 |
| hypothetical protein | A5893_05655 | Not Available | Negative | 1432002 - 1433693 | 63928.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
