Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase 2 catalytic subunit | A5893_05555 | Not Available | Negative | 1409485 - 1411224 | 63347.2 |
| dihydroxy-acid dehydratase | A5893_05560 | Not Available | Negative | 1411345 - 1413024 | 59483.1 |
| branched-chain amino acid aminotransferase | A5893_05565 | Not Available | Negative | 1413025 - 1413912 | 33154.6 |
| hypothetical protein | A5893_05570 | Not Available | Negative | 1414383 - 1414631 | 8852.76 |
| f0f1 atp synthase subunit beta | A5893_05575 | Not Available | Negative | 1414706 - 1416214 | 54601.5 |
| g-d-s-l family lipolytic protein | A5893_05580 | Not Available | Positive | 1416472 - 1417767 | 45944.1 |
| hypothetical protein | A5893_05585 | Not Available | Positive | 1417938 - 1420625 | 97879.3 |
| nad(p)-dependent oxidoreductase | A5893_05590 | Not Available | Positive | 1421002 - 1421916 | 33965.9 |
| peroxiredoxin | A5893_05595 | Not Available | Positive | 1421943 - 1422407 | 17213.6 |
| hypothetical protein | A5893_05600 | Not Available | Positive | 1422422 - 1423405 | 35206.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
