Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-diphosphatase | A5893_00150 | Not Available | Positive | 106378 - 107172 | 28963.5 |
| trna pseudouridine(55) synthase | A5893_00155 | Not Available | Positive | 107172 - 107894 | 27417.8 |
| riboflavin biosynthesis protein ribf | A5893_00160 | Not Available | Positive | 108026 - 109051 | 39130.9 |
| hypothetical protein | A5893_00165 | Not Available | Negative | 109058 - 109513 | 17633.6 |
| hypothetical protein | A5893_00170 | Not Available | Negative | 109557 - 109967 | 15416.4 |
| hypothetical protein | A5893_00175 | Not Available | Negative | 110164 - 110823 | 25685.6 |
| hypothetical protein | A5893_00180 | Not Available | Negative | 110899 - 111609 | 25813.1 |
| pyruvate dehydrogenase | A5893_00185 | Not Available | Negative | 111807 - 112793 | 36146.6 |
| tonb-dependent receptor | A5893_00190 | Not Available | Negative | 113306 - 115354 | 76554.5 |
| hypothetical protein | A5893_00195 | Not Available | Negative | 115377 - 116894 | 58754.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
