Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_05505 | Not Available | Positive | 1398041 - 1398424 | 14066.0 |
| hypothetical protein | A5893_05510 | Not Available | Positive | 1398418 - 1398735 | 11800.0 |
| 3-isopropylmalate dehydrogenase | A5893_05515 | Not Available | Negative | 1398876 - 1399934 | 38515.1 |
| 2-isopropylmalate synthase | A5893_05520 | Not Available | Negative | 1400029 - 1401618 | 58685.1 |
| 3-isopropylmalate dehydratase | A5893_05525 | Not Available | Negative | 1401638 - 1402234 | 22138.2 |
| isopropylmalate isomerase | A5893_05530 | Not Available | Negative | 1402402 - 1403811 | 50580.4 |
| 2-isopropylmalate synthase | A5893_05535 | Not Available | Negative | 1404056 - 1405564 | 55350.2 |
| molybdenum abc transporter atp-binding protein | A5893_05540 | Not Available | Negative | 1405637 - 1407142 | 56182.2 |
| ketol-acid reductoisomerase | A5893_05545 | Not Available | Negative | 1407289 - 1408770 | 54398.6 |
| acetolactate synthase small subunit | A5893_05550 | Not Available | Negative | 1408819 - 1409421 | 23322.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
