Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_05455 | Not Available | Positive | 1388961 - 1391417 | 93783.0 |
| transposase | A5893_05460 | Not Available | Positive | 1391514 - 1392068 | 21750.9 |
| hypothetical protein | A5893_05465 | Not Available | Negative | 1392133 - 1392333 | 8071.89 |
| nadph-dependent fmn reductase | A5893_05470 | Not Available | Negative | 1392418 - 1392939 | 19420.6 |
| chromosome partitioning protein para | A5893_05475 | Not Available | Positive | 1393103 - 1393909 | 29522.7 |
| chromosome partitioning protein parb | A5893_05480 | Not Available | Positive | 1393906 - 1394838 | 35182.2 |
| hypothetical protein | A5893_05485 | Not Available | Positive | 1394838 - 1395509 | 25430.8 |
| 4-hydroxy-tetrahydrodipicolinate reductase | A5893_05490 | Not Available | Positive | 1395561 - 1396304 | 27658.9 |
| s26 family signal peptidase | A5893_05495 | Not Available | Positive | 1396311 - 1397408 | 42263.7 |
| transcriptional regulator | A5893_05500 | Not Available | Positive | 1397566 - 1397961 | 15297.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
