Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | A5893_05345 | Not Available | Positive | 1365727 - 1366473 | 28869.2 |
| hypothetical protein | A5893_05350 | Not Available | Negative | 1366609 - 1367037 | 16039.3 |
| peptidase m16 | A5893_05355 | Not Available | Negative | 1367428 - 1368822 | 51534.8 |
| peptidase m16 | A5893_05360 | Not Available | Negative | 1368916 - 1370232 | 49934.1 |
| glucose-6-phosphate isomerase | A5893_05365 | Not Available | Positive | 1370522 - 1372162 | 61856.5 |
| hopj type iii effector protein | A5893_05370 | Not Available | Positive | 1372315 - 1372656 | 12867.9 |
| hypothetical protein | A5893_05375 | Not Available | Negative | 1372676 - 1373392 | 27944.3 |
| galactose mutarotase | A5893_05380 | Not Available | Negative | 1373412 - 1374431 | 37743.8 |
| peptide-methionine (s)-s-oxide reductase | A5893_05385 | Not Available | Positive | 1374556 - 1375101 | 20525.2 |
| preprotein translocase subunit secg | A5893_05390 | Not Available | Negative | 1375185 - 1375517 | 11433.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
