Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pterin-4-alpha-carbinolamine dehydratase | A5893_05295 | Not Available | Positive | 1357138 - 1357374 | 9151.92 |
| hypothetical protein | A5893_05300 | Not Available | Positive | 1357397 - 1359139 | 67195.2 |
| rhomboid family intramembrane serine protease | A5893_05305 | Not Available | Positive | 1359139 - 1359759 | 23584.7 |
| endonuclease iii | A5893_05310 | Not Available | Positive | 1359778 - 1360530 | 28590.8 |
| dna recombination/repair protein reca | A5893_05315 | Not Available | Positive | 1360667 - 1361686 | 36544.3 |
| hypothetical protein | A5893_05320 | Not Available | Negative | 1361756 - 1362202 | 16516.1 |
| hypothetical protein | A5893_05325 | Not Available | Negative | 1362396 - 1363082 | 23323.9 |
| hypothetical protein | A5893_05330 | Not Available | Positive | 1363154 - 1363990 | 31221.8 |
| hypothetical protein | A5893_05335 | Not Available | Negative | 1363941 - 1364438 | 19147.1 |
| hypothetical protein | A5893_05340 | Not Available | Positive | 1364688 - 1365734 | 40246.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
