Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_05190 | Not Available | Positive | 1326724 - 1327542 | 29232.4 |
| hypothetical protein | A5893_05195 | Not Available | Positive | 1327554 - 1329995 | 90765.4 |
| hypothetical protein | A5893_05200 | Not Available | Positive | 1330040 - 1331278 | 46286.6 |
| sulfatase | A5893_05205 | Not Available | Positive | 1331401 - 1333476 | 78165.8 |
| hypothetical protein | A5893_05210 | Not Available | Positive | 1333484 - 1334791 | 48074.9 |
| n-acetylgalactosamine-6-sulfatase | A5893_05215 | Not Available | Positive | 1334938 - 1336371 | 53497.3 |
| hypothetical protein | A5893_05220 | Not Available | Positive | 1336396 - 1340436 | 153780.0 |
| hypothetical protein | A5893_05225 | Not Available | Positive | 1340570 - 1341922 | 52059.8 |
| hypothetical protein | A5893_05230 | Not Available | Positive | 1341990 - 1343591 | 61739.8 |
| hypothetical protein | A5893_05235 | Not Available | Negative | 1343638 - 1345899 | 85100.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
