Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-beta-xylanase | A5893_05090 | Not Available | Positive | 1296719 - 1297783 | 41428.4 |
| galactose mutarotase | A5893_05095 | Not Available | Positive | 1297785 - 1298960 | 43231.2 |
| hypothetical protein | A5893_05100 | Not Available | Positive | 1298992 - 1300410 | 53365.9 |
| glycoside hydrolase | A5893_05105 | Not Available | Positive | 1300383 - 1301486 | 41787.4 |
| hypothetical protein | A5893_05110 | Not Available | Negative | 1301556 - 1302698 | 43097.0 |
| hypothetical protein | A5893_05115 | Not Available | Positive | 1303439 - 1306633 | 116760.0 |
| hypothetical protein | A5893_05120 | Not Available | Positive | 1306653 - 1308401 | 64324.7 |
| hypothetical protein | A5893_05125 | Not Available | Positive | 1308474 - 1309754 | 45659.7 |
| hypothetical protein | A5893_05130 | Not Available | Positive | 1309804 - 1310691 | 32898.4 |
| hypothetical protein | A5893_05135 | Not Available | Negative | 1311338 - 1312225 | 34191.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
