Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_00100 | Not Available | Negative | 96363 - 97070 | 27467.3 |
| hypothetical protein | A5893_00105 | Not Available | Positive | 97202 - 97990 | 29956.9 |
| 30s ribosomal protein s15 | A5893_00110 | Not Available | Positive | 98068 - 98352 | 10663.2 |
| dna topoisomerase iv subunit b | A5893_00115 | Not Available | Negative | 98545 - 100506 | 72669.4 |
| hypothetical protein | A5893_00120 | Not Available | Positive | 100890 - 102380 | 54662.3 |
| hypothetical protein | A5893_00125 | Not Available | Positive | 102512 - 103438 | 35830.9 |
| sodium:proton antiporter | A5893_00130 | Not Available | Negative | 103528 - 104763 | 45534.3 |
| hypothetical protein | A5893_00135 | Not Available | Positive | 104857 - 105120 | 10216.5 |
| cell division protein ftsx | A5893_00140 | Not Available | Positive | 105264 - 106142 | 32778.8 |
| hypothetical protein | A5893_00145 | Not Available | Positive | 106145 - 106381 | 8617.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
