Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_04980 | Not Available | Positive | 1259879 - 1261630 | 65559.3 |
| glucosamine-6-phosphate deaminase | A5893_04985 | Not Available | Negative | 1262004 - 1263923 | 72574.5 |
| mfs transporter | A5893_04990 | Not Available | Negative | 1264139 - 1265419 | 45892.9 |
| aminoglycoside phosphotransferase | A5893_04995 | Not Available | Negative | 1265486 - 1266535 | 40432.3 |
| laci family transcriptional regulator | A5893_05000 | Not Available | Negative | 1266624 - 1267655 | 38441.3 |
| glycosyl hydrolase | A5893_05005 | Not Available | Positive | 1267833 - 1269179 | 50193.4 |
| arylsulfatase | A5893_05010 | Not Available | Negative | 1269282 - 1270844 | 57112.4 |
| hypothetical protein | A5893_05020 | Not Available | Positive | 1272728 - 1276021 | 120030.0 |
| carbohydrate-binding protein susd | A5893_05025 | Not Available | Positive | 1276041 - 1277792 | 65871.7 |
| hypothetical protein | A5893_05030 | Not Available | Positive | 1277797 - 1279173 | 51221.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
