Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_04830 | Not Available | Positive | 1210143 - 1211816 | 62767.9 |
| beta-glucuronidase | A5893_04835 | Not Available | Positive | 1211899 - 1213731 | 70371.4 |
| hypothetical protein | A5893_04840 | Not Available | Positive | 1213996 - 1215657 | 57877.0 |
| glycosyl hydrolase | A5893_04845 | Not Available | Positive | 1215724 - 1218162 | 90293.7 |
| 1,4-beta-xylanase | A5893_04850 | Not Available | Positive | 1218377 - 1219471 | 41292.4 |
| hypothetical protein | A5893_04855 | Not Available | Positive | 1219500 - 1220912 | 55107.1 |
| hypothetical protein | A5893_04860 | Not Available | Positive | 1220956 - 1222146 | 44710.6 |
| hypothetical protein | A5893_04865 | Not Available | Positive | 1222295 - 1222999 | 25893.4 |
| biopolymer transporter tol | A5893_04870 | Not Available | Positive | 1223274 - 1224077 | 29890.1 |
| hypothetical protein | A5893_04875 | Not Available | Positive | 1224130 - 1225233 | 41787.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
