Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_04730 | Not Available | Negative | 1178314 - 1179087 | 28999.0 |
| rna polymerase subunit sigma-70 | A5893_04735 | Not Available | Negative | 1179077 - 1179649 | 21927.4 |
| hypothetical protein | A5893_04740 | Not Available | Positive | 1179894 - 1180790 | 33507.0 |
| hypothetical protein | A5893_04745 | Not Available | Positive | 1180802 - 1181227 | 17123.7 |
| hypothetical protein | A5893_04750 | Not Available | Positive | 1181262 - 1181669 | 15284.1 |
| hypothetical protein | A5893_04755 | Not Available | Negative | 1182156 - 1182719 | 21277.9 |
| hypothetical protein | A5893_04760 | Not Available | Negative | 1182836 - 1184167 | 49416.2 |
| hypothetical protein | A5893_04765 | Not Available | Negative | 1184201 - 1184821 | 22547.2 |
| oxidoreductase | A5893_04770 | Not Available | Negative | 1185253 - 1186608 | 50805.1 |
| sugar phosphate isomerase | A5893_04775 | Not Available | Negative | 1186747 - 1187607 | 32441.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
