Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylhomoserine sulfhydrylase | A5893_04680 | Not Available | Negative | 1156158 - 1157327 | 43272.1 |
| four helix bundle protein | A5893_04685 | Not Available | Negative | 1157470 - 1157847 | 14749.6 |
| excinuclease abc subunit a | A5893_04690 | Not Available | Negative | 1158101 - 1160902 | 104330.0 |
| rna polymerase subunit sigma-24 | A5893_04695 | Not Available | Positive | 1161635 - 1162222 | 22901.9 |
| hypothetical protein | A5893_04700 | Not Available | Positive | 1162295 - 1162495 | 7472.7 |
| hypothetical protein | A5893_04705 | Not Available | Negative | 1162588 - 1163478 | 31953.9 |
| hypothetical protein | A5893_04710 | Not Available | Positive | 1163721 - 1164731 | 35478.9 |
| hypothetical protein | A5893_04715 | Not Available | Positive | 1164865 - 1176105 | 391458.0 |
| sugar abc transporter atp-binding protein | A5893_04720 | Not Available | Negative | 1176291 - 1177271 | 36471.4 |
| hypothetical protein | A5893_04725 | Not Available | Negative | 1177484 - 1178293 | 30434.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
