Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl(octanoyl) transferase | A5893_04630 | Not Available | Negative | 1145926 - 1146630 | 26913.9 |
| 4'-phosphopantetheinyl transferase | A5893_04635 | Not Available | Negative | 1146633 - 1147271 | 24797.8 |
| dctp deaminase | A5893_04640 | Not Available | Positive | 1147344 - 1147880 | 20074.1 |
| hypothetical protein | A5893_04645 | Not Available | Positive | 1147959 - 1150655 | 99977.1 |
| enoyl-coa hydratase | A5893_04650 | Not Available | Positive | 1150665 - 1151429 | 28473.7 |
| cytochrome c | A5893_04655 | Not Available | Negative | 1151452 - 1151865 | 14803.2 |
| sorbosone dehydrogenase | A5893_04660 | Not Available | Negative | 1151890 - 1153155 | 46827.2 |
| argininosuccinate lyase | A5893_04665 | Not Available | Positive | 1153555 - 1154886 | 50314.1 |
| rrf2 family transcriptional regulator | A5893_04670 | Not Available | Negative | 1155039 - 1155479 | 16248.9 |
| osmotically inducible protein osmc | A5893_04675 | Not Available | Negative | 1155592 - 1156005 | 15060.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
