Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | A5893_04580 | Not Available | Positive | 1134184 - 1135032 | 32075.5 |
| hypothetical protein | A5893_04585 | Not Available | Negative | 1135062 - 1135250 | 6798.6 |
| fatty acid desaturase | A5893_04590 | Not Available | Positive | 1135242 - 1135946 | 27849.0 |
| ferrochelatase | A5893_04595 | Not Available | Positive | 1135939 - 1136955 | 38309.2 |
| short-chain dehydrogenase | A5893_04600 | Not Available | Negative | 1137020 - 1137895 | 31385.8 |
| glucosidase | A5893_04605 | Not Available | Negative | 1138300 - 1140894 | 100962.0 |
| sodium:solute symporter | A5893_04610 | Not Available | Positive | 1141452 - 1143146 | 62893.7 |
| hypothetical protein | A5893_04615 | Not Available | Negative | 1143695 - 1144552 | 30956.1 |
| hypothetical protein | A5893_04620 | Not Available | Negative | 1144555 - 1145037 | 17068.8 |
| lysophospholipase | A5893_04625 | Not Available | Negative | 1145224 - 1145826 | 22640.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
