Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_17395 | Not Available | Negative | 1124571 - 1125098 | 20011.0 |
| hypothetical protein | A5893_17400 | Not Available | Positive | 1125224 - 1125829 | 23594.7 |
| hypothetical protein | A5893_17410 | Not Available | Negative | 1126768 - 1127343 | 22461.7 |
| hypothetical protein | A5893_04545 | Not Available | Negative | 1127631 - 1128311 | 26861.5 |
| clp protease clps | A5893_04550 | Not Available | Negative | 1128421 - 1128705 | 10890.9 |
| d-alanyl-d-alanine carboxypeptidase | A5893_04555 | Not Available | Positive | 1128852 - 1130246 | 50852.2 |
| phytoene dehydrogenase | A5893_04560 | Not Available | Positive | 1130297 - 1131763 | 55459.1 |
| glycerol acyltransferase | A5893_04565 | Not Available | Positive | 1131788 - 1132411 | 24251.2 |
| glycosyl transferase family 2 | A5893_04570 | Not Available | Positive | 1132414 - 1133508 | 42294.5 |
| hypothetical protein | A5893_04575 | Not Available | Positive | 1133505 - 1134146 | 24391.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
