Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine transporter lyse | A5893_00050 | Not Available | Negative | 87320 - 87949 | 23490.6 |
| cytidine deaminase | A5893_00055 | Not Available | Positive | 88128 - 88595 | 16985.4 |
| hypothetical protein | A5893_00060 | Not Available | Positive | 88598 - 89437 | 31980.9 |
| hypothetical protein | A5893_00065 | Not Available | Negative | 89434 - 89634 | 7671.44 |
| peptidase m28 | A5893_00070 | Not Available | Positive | 89861 - 91411 | 57143.9 |
| hypothetical protein | A5893_00075 | Not Available | Positive | 91698 - 92870 | 44808.3 |
| thioesterase | A5893_00080 | Not Available | Negative | 92907 - 93323 | 16297.8 |
| hypothetical protein | A5893_00085 | Not Available | Negative | 93320 - 94039 | 27884.0 |
| hypothetical protein | A5893_00090 | Not Available | Positive | 94103 - 95311 | 47163.4 |
| glyoxalase | A5893_00095 | Not Available | Negative | 95301 - 96359 | 40551.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
