Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophorhabdia
Order
Syntrophorhabdales
Family
Syntrophorhabdaceae
Genus
Syntrophorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophorhabdia |
| Order | Syntrophorhabdales |
| Family | Syntrophorhabdaceae |
| Genus | Syntrophorhabdus |
| Species | Syntrophorhabdus sp. PtaU1.Bin058 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
841311 bp
Thymine Count
842835 bp
Guanine Count
880669 bp
Cytosine Count
880303 bp
Genome Length
3445118 bp
Protein-coding Genes
3194 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A4E64_00729 | Not Available | Positive | 782337 - 783335 | 37230.6 |
| diaminopimelate decarboxylase | A4E64_00730 | Not Available | Positive | 783437 - 784666 | 45431.5 |
| diaminopimelate epimerase | A4E64_00731 | Not Available | Positive | 784702 - 785517 | 30150.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | A4E64_00732 | Not Available | Positive | 785597 - 786484 | 32471.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | A4E64_00733 | Not Available | Positive | 786501 - 787295 | 28880.2 |
| redox-sensing transcriptional repressor rex | A4E64_00734 | Not Available | Positive | 787669 - 788310 | 23920.3 |
| hypothetical protein | A4E64_00735 | Not Available | Positive | 788319 - 788528 | 7522.76 |
| atp-dependent dethiobiotin synthetase biod 1 | A4E64_00736 | Not Available | Positive | 788528 - 789244 | 25986.2 |
| aspartate aminotransferase | A4E64_00737 | Not Available | Negative | 789278 - 790456 | 44593.4 |
| aspartate aminotransferase | A4E64_00738 | Not Available | Negative | 790460 - 791650 | 45185.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
