Syntrophorhabdus sp. PtaB.Bin027

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Syntrophorhabdia

Order

Syntrophorhabdales

Family

Syntrophorhabdaceae

Genus

Syntrophorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassSyntrophorhabdia
OrderSyntrophorhabdales
FamilySyntrophorhabdaceae
GenusSyntrophorhabdus
SpeciesSyntrophorhabdus sp. PtaB.Bin027
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Syntrophorhabdus sp. PtaB.Bin027


Gene Summary

Adenine Count

866837 bp

Thymine Count

860120 bp

Guanine Count

676110 bp

Cytosine Count

670951 bp

Genome Length

3074018 bp

Protein-coding Genes

2970 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinA4E59_00001Not Available+22 - 63022312.0
hypothetical proteinA4E59_00002Not Available+687 - 9178103.76
hypothetical proteinA4E59_00003Not Available-4092 - 464020287.2
hypothetical proteinA4E59_00004Not Available+5199 - 53937420.15
transposase dde domain proteinA4E59_00005Not Available+5454 - 596619916.0
hypothetical proteinA4E59_00006Not Available+6012 - 62308158.85
hypothetical proteinA4E59_00007Not Available+6255 - 662613994.2
hypothetical proteinA4E59_00008Not Available-6772 - 707111481.1
universal stress protein gA4E59_00009Not Available-7514 - 796016328.0
3-oxoacyl-(acyl-carrier-protein) reductase fabgA4E59_00010Not Available+8358 - 920930590.8

Displaying genes 1 – 10 of 3011 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

13 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm0000645L-arabinonateC5H9O6Chemical structure of L-arabinonateNot available
Average165.122Da
Monoisotopic165.0404616Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm00015513D-3,5/4-trihydroxycyclohexane-1,2-dioneC6H8O5Chemical structure of 3D-3,5/4-trihydroxycyclohexane-1,2-dioneNot available
Average160.125Da
Monoisotopic160.0371734Da
BASm0001864Cr(6+)CrChemical structure of Cr(6+)Not available
Average51.9961Da
Monoisotopic51.9405119Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019232-dehydro-3-deoxy-L-arabinonateC5H7O5Chemical structure of 2-dehydro-3-deoxy-L-arabinonateNot available
Average147.107Da
Monoisotopic147.0298969Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da

Displaying 1–10 of 13 metabolites