Syntrophorhabdus sp. PtaB.Bin047

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Syntrophorhabdia

Order

Syntrophorhabdales

Family

Syntrophorhabdaceae

Genus

Syntrophorhabdus

Description

Syntrophorhabdus sp. PtaB.Bin047 is a microbial organism characterized by its single replicon, as indicated by the presence of one genomic structure. The organism is cataloged under the accession number MVQP00000000.1, which provides a reference for its genomic information. Syntrophorhabdus species are known for their role in anaerobic digestion processes, particularly in the degradation of complex organic compounds. They often engage in syntrophic relationships with other microorganisms, which allows them to thrive in environments where they assist in the breakdown of fatty acids and other organic substrates. This capability is crucial for maintaining the balance of microbial communities in anaerobic environments, such as those found in sediments, landfills, and the digestive systems of ruminants. The ecological insight regarding Syntrophorhabdus sp. PtaB.Bin047 lies in its potential contribution to biogeochemical cycling within anaerobic ecosystems. By participating in the degradation of organic materials, this organism helps facilitate nutrient recycling, which is essential for sustaining the health of microbial communities and the overall ecosystem. Understanding the role of Syntrophorhabdus sp. PtaB.Bin047 can provide valuable insights into the dynamics of anaerobic microbial communities and their impact on environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassSyntrophorhabdia
OrderSyntrophorhabdales
FamilySyntrophorhabdaceae
GenusSyntrophorhabdus
SpeciesSyntrophorhabdus sp. PtaB.Bin047
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Syntrophorhabdus sp. PtaB.Bin047 A4E60_contig000269, whole

Gene Summary

Adenine Count

776067 bp

Thymine Count

765140 bp

Guanine Count

1051363 bp

Cytosine Count

1045150 bp

Genome Length

3637720 bp

Protein-coding Genes

3495 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative oxidoreductase ycjsA4E60_00452Not AvailablePositive436782 - 43781038444.9
3-oxoacyl-(acyl-carrier-protein) reductase fabgA4E60_00453Not AvailablePositive437830 - 43854925390.6
glycerate dehydrogenaseA4E60_00454Not AvailablePositive438596 - 43956434639.1
phosphoheptose isomerase 1A4E60_00455Not AvailablePositive439598 - 44020621967.1
3-dehydroquinate synthaseA4E60_00456Not AvailablePositive440266 - 44136941401.2
hypothetical proteinA4E60_00457Not AvailablePositive441366 - 44320770497.7
hypothetical proteinA4E60_00458Not AvailablePositive443236 - 44414133624.2
udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferaseA4E60_00459Not AvailablePositive444138 - 44525041547.8
udp-glc:alpha-d-glcnac-diphosphoundecaprenol beta-1,3-glucosyltransferase wfgdA4E60_00460Not AvailablePositive445309 - 44625035803.1
hypothetical proteinA4E60_00461Not AvailablePositive446268 - 44776155258.4

Displaying genes 491 – 500 of 3587 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.