Deltaproteobacteria bacterium RBG_16_64_85

Kingdom

Phylum

Class

Deltaproteobacteria

Order

Family

Genus

Description

Deltaproteobacteria bacterium RBG_16_64_85 is characterized by having a single replicon, which suggests a streamlined genomic structure. This bacterium is cataloged under the accession number MGQW00000000.1, which serves as a unique identifier for its genomic data in biological databases. Deltaproteobacteria are known for their diverse metabolic capabilities, often playing significant roles in various ecological niches, particularly in sulfur cycling and the degradation of complex organic materials. While specific metabolic pathways for RBG_16_64_85 are not detailed, its classification within the Deltaproteobacteria indicates potential involvement in anaerobic processes and interactions with other microbial communities. The single replicon feature may also imply that Deltaproteobacteria bacterium RBG_16_64_85 has adapted to specific environmental conditions that favor a less complex genomic architecture, potentially enhancing its efficiency in nutrient uptake and energy conservation. This trait can be advantageous in environments where resource availability fluctuates, allowing for rapid adaptation and survival. In conclusion, Deltaproteobacteria bacterium RBG_16_64_85, with its single replicon and classification, may contribute to the ecological dynamics of its habitat, particularly in processes related to organic matter decomposition and nutrient cycling, which are essential for maintaining the health of ecosystems.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deltaproteobacteria bacterium RBG_16_64_85


Gene Summary

Adenine Count

408083 bp

Thymine Count

397946 bp

Guanine Count

709867 bp

Cytosine Count

691226 bp

Genome Length

2208713 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA2Z13_10180Not AvailableNegative605 - 99113572.4
hypothetical proteinA2Z13_10185Not AvailableNegative1035 - 141814127.2
fis family transcriptional regulatorA2Z13_10190Not AvailablePositive1599 - 299051004.6
hypothetical proteinA2Z13_10195Not AvailablePositive3585 - 38007060.61
hypothetical proteinA2Z13_10200Not AvailablePositive3824 - 415611896.1
Ncrna_class:otherNot AvailableNot AvailablePositive5337 - 5518Not Available
serine--trna ligaseA2Z13_10205Not AvailableNegative4298 - 557547503.0
dehypoxanthine futalosine cyclaseA2Z13_10210Not AvailableNegative5563 - 669040602.6
5s ribosomal rnaNot AvailableNot AvailablePositive6803 - 6919Not Available
aminofutalosine synthase mqneA2Z13_10215Not AvailableNegative6690 - 778141021.4

Displaying genes 1 – 10 of 2117 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

242 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da

Displaying 1–10 of 242 metabolites

Health Effects

No health effects information available for this bacterium.