Burkholderia sp. PAMC 28687

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. PAMC 28687 is characterized by having a total of eight replicons. This trait indicates a complex genomic structure, which is typical for many members of the Burkholderia genus, known for their diverse metabolic capabilities and adaptability to various environments. The genomic sequences of this strain are represented by multiple accessions: NZ_CP014509.1, NZ_CP014511.1, NZ_CP014506.1, NZ_CP014507.1, NZ_CP014508.1, NZ_CP014512.1, NZ_CP014505.1, and NZ_CP014510.1. These accessions suggest that the strain has been well-documented in genomic databases, providing insights into its genetic composition and potential functionalities. The presence of multiple replicons may allow for a greater flexibility in gene expression and regulation, contributing to its ecological versatility. Burkholderia species are often associated with various environments, including soil and water, and can play significant roles in nutrient cycling and bioremediation. The genomic complexity of Burkholderia sp. PAMC 28687 might enable it to thrive in diverse ecological niches, potentially facilitating interactions with other microorganisms and influencing community dynamics. This adaptability is particularly significant in microbial ecology, where the presence of such versatile organisms can impact ecosystem health and resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. PAMC 28687
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1356 bp

Thymine Count

1303 bp

Guanine Count

1710 bp

Cytosine Count

1717 bp

Genome Length

6086 bp

Protein-coding Genes

8 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAX768_RS31060Not AvailablePositive250 - 65715185.5
hypothetical proteinAX768_RS31065Not AvailablePositive753 - 252565429.2
response regulatorAX768_RS31075Not AvailablePositive2990 - 346017218.9
hypothetical proteinAX768_RS33150Not AvailablePositive3553 - 395714498.5
hamp domain-containing sensor histidine kinaseAX768_RS31085Not AvailableNegative4473 - 560640904.7
hypothetical proteinAX768_RS33155Not AvailableNegative5792 - 605810062.2
glutathione s-transferase n-terminal domain-containing proteinAX768_RS34330Not AvailableNegative6805 - 903683257.4
is4 family transposaseAX768_RS31100Not AvailablePositive9184 - 1053351209.8
plasmid mobilization proteinAX768_RS31105Not AvailableNegative10591 - 1093813031.0
hypothetical proteinAX768_RS31110Not AvailablePositive11253 - 1159712458.2

Displaying genes 1 – 10 of 6409 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.