Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_10381 | Not Available | Positive | 1225726 - 1225986 | 10146.5 |
| hypothetical protein | SAMN04487898_10382 | Not Available | Negative | 1225988 - 1226458 | 18192.4 |
| hypothetical protein | SAMN04487898_10383 | Not Available | Positive | 1226999 - 1227505 | 19223.8 |
| hypothetical protein | SAMN04487898_10384 | Not Available | Negative | 1227585 - 1227929 | 13133.1 |
| hypothetical protein | SAMN04487898_10385 | Not Available | Negative | 1227971 - 1228372 | 15119.0 |
| dipeptidase e | SAMN04487898_10386 | Not Available | Positive | 1228446 - 1229156 | 26289.6 |
| rlob-like protein | SAMN04487898_10387 | Not Available | Negative | 1229207 - 1229839 | 24695.9 |
| atpase/gtpase, aaa15 family | SAMN04487898_10388 | Not Available | Negative | 1229829 - 1231142 | 50231.8 |
| predicted ntp pyrophosphohydrolase, nudix family | SAMN04487898_10389 | Not Available | Negative | 1231382 - 1231843 | 17433.8 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN04487898_10390 | Not Available | Negative | 1231858 - 1232286 | 16306.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

