Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN04487898_10371 | Not Available | Negative | 1211056 - 1211388 | 13026.5 |
| hypothetical protein | SAMN04487898_10372 | Not Available | Negative | 1211399 - 1212409 | 38500.6 |
| hypothetical protein | SAMN04487898_10373 | Not Available | Positive | 1212722 - 1213198 | 17971.5 |
| hypothetical protein | SAMN04487898_10374 | Not Available | Negative | 1213501 - 1217733 | 164322.0 |
| error-prone dna polymerase | SAMN04487898_10375 | Not Available | Negative | 1217868 - 1221053 | 120019.0 |
| protein imub | SAMN04487898_10376 | Not Available | Negative | 1221060 - 1222568 | 56897.3 |
| protein imua | SAMN04487898_10377 | Not Available | Negative | 1222571 - 1223299 | 26575.3 |
| hypothetical protein | SAMN04487898_10378 | Not Available | Negative | 1223406 - 1224035 | 24502.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_10379 | Not Available | Negative | 1224049 - 1224780 | 28541.8 |
| hypothetical protein | SAMN04487898_10380 | Not Available | Positive | 1225067 - 1225708 | 23954.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

