Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnab-like helicase c terminal domain-containing protein | SAMN04487898_10361 | Not Available | Negative | 1199639 - 1200502 | 32187.3 |
| hypothetical protein | SAMN04487898_10362 | Not Available | Positive | 1200545 - 1200916 | 14188.5 |
| amidohydrolase family protein | SAMN04487898_10363 | Not Available | Positive | 1200964 - 1202601 | 61533.1 |
| bacteriophage abortive infection abih | SAMN04487898_10364 | Not Available | Positive | 1202660 - 1203901 | 48574.9 |
| hypothetical protein | SAMN04487898_10365 | Not Available | Positive | 1204198 - 1204569 | 14214.7 |
| hypothetical protein | SAMN04487898_10366 | Not Available | Positive | 1204566 - 1204811 | 8809.55 |
| protein of unknown function | SAMN04487898_10367 | Not Available | Positive | 1204944 - 1205789 | 32728.6 |
| hypothetical protein | SAMN04487898_10368 | Not Available | Negative | 1205878 - 1206750 | 33800.9 |
| superfamily i dna or rna helicase | SAMN04487898_10369 | Not Available | Negative | 1206764 - 1208590 | 70299.0 |
| putative atp-dependent endonuclease of the old family | SAMN04487898_10370 | Not Available | Negative | 1208590 - 1210518 | 73637.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

