Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| family of unknown function | SAMN04487898_10341 | Not Available | Positive | 1179795 - 1180649 | 33528.8 |
| hypothetical protein | SAMN04487898_10342 | Not Available | Positive | 1180692 - 1181438 | 28482.5 |
| pin domain-containing protein | SAMN04487898_10343 | Not Available | Positive | 1182058 - 1183338 | 49363.3 |
| protein of unknown function | SAMN04487898_10344 | Not Available | Negative | 1183769 - 1184767 | 39145.3 |
| hypothetical protein | SAMN04487898_10345 | Not Available | Negative | 1184771 - 1185712 | 35942.2 |
| hypothetical protein | SAMN04487898_10346 | Not Available | Negative | 1185804 - 1187507 | 65738.0 |
| transcriptional regulator, tetr family | SAMN04487898_10347 | Not Available | Positive | 1187864 - 1188595 | 27278.3 |
| multidrug resistance efflux pump | SAMN04487898_10348 | Not Available | Negative | 1188609 - 1189913 | 50157.7 |
| atp-binding cassette, subfamily b | SAMN04487898_10349 | Not Available | Negative | 1189903 - 1192104 | 83872.1 |
| spasm domain peptide maturase, grasp-with-spasm system | SAMN04487898_10350 | Not Available | Negative | 1192094 - 1193176 | 41823.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

