Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_10331 | Not Available | Negative | 1169142 - 1169372 | 8628.4 |
| dihydrofolate reductase | SAMN04487898_10332 | Not Available | Negative | 1169437 - 1170006 | 21062.4 |
| cytochrome c peroxidase | SAMN04487898_10333 | Not Available | Negative | 1170094 - 1171935 | 68367.5 |
| phospholipase c | SAMN04487898_10334 | Not Available | Negative | 1171964 - 1173310 | 50103.5 |
| pas domain s-box-containing protein | SAMN04487898_10335 | Not Available | Negative | 1173389 - 1174483 | 41291.3 |
| dihydrofolate reductase | SAMN04487898_10336 | Not Available | Negative | 1174569 - 1175117 | 20413.3 |
| paraquat-inducible protein a | SAMN04487898_10337 | Not Available | Positive | 1175360 - 1176676 | 49713.8 |
| paraquat-inducible protein a | SAMN04487898_10338 | Not Available | Positive | 1176666 - 1177997 | 49995.7 |
| hypothetical protein | SAMN04487898_10339 | Not Available | Negative | 1178017 - 1178484 | 17665.3 |
| hypothetical protein | SAMN04487898_10340 | Not Available | Negative | 1178855 - 1179628 | 29466.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

