Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04487898_10321 | Not Available | Negative | 1151137 - 1152978 | 68732.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10322 | Not Available | Negative | 1152991 - 1156113 | 115045.0 |
| heparin/heparan-sulfate lyase | SAMN04487898_10323 | Not Available | Negative | 1156686 - 1159463 | 104271.0 |
| predicted acyltransferase | SAMN04487898_10324 | Not Available | Negative | 1159474 - 1160601 | 42280.9 |
| susd family protein | SAMN04487898_10325 | Not Available | Negative | 1160706 - 1162154 | 53318.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10326 | Not Available | Negative | 1162165 - 1165326 | 116136.0 |
| sugar lactone lactonase yvre | SAMN04487898_10327 | Not Available | Positive | 1165871 - 1166737 | 31770.6 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04487898_10328 | Not Available | Positive | 1166741 - 1167754 | 36451.9 |
| hypothetical protein | SAMN04487898_10329 | Not Available | Negative | 1167747 - 1168484 | 27501.5 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN04487898_10330 | Not Available | Negative | 1168533 - 1169081 | 21262.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

