Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | SAMN04487898_10311 | Not Available | Negative | 1140006 - 1141022 | 36811.0 |
| mn2+ and fe2+ transporters of the nramp family | SAMN04487898_10312 | Not Available | Negative | 1141041 - 1142246 | 42948.9 |
| solute:na+ symporter, sss family | SAMN04487898_10313 | Not Available | Negative | 1142424 - 1143995 | 57883.6 |
| neutral/alkaline non-lysosomal ceramidase, n-terminal | SAMN04487898_10314 | Not Available | Negative | 1144028 - 1145389 | 49789.8 |
| glucose 1-dehydrogenase | SAMN04487898_10315 | Not Available | Negative | 1145386 - 1146159 | 27767.6 |
| galactonate dehydratase | SAMN04487898_10316 | Not Available | Negative | 1146177 - 1147355 | 44265.0 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN04487898_10317 | Not Available | Negative | 1147355 - 1148689 | 48711.1 |
| dna-binding transcriptional regulator, gntr family | SAMN04487898_10318 | Not Available | Negative | 1148916 - 1149554 | 24371.2 |
| protein of unknown function | SAMN04487898_10319 | Not Available | Negative | 1149696 - 1150694 | 36127.1 |
| hypothetical protein | SAMN04487898_10320 | Not Available | Negative | 1150709 - 1151113 | 14816.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

