Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase dde domain-containing protein | SAMN04487898_1031 | Not Available | Positive | 1126455 - 1126610 | 5888.33 |
| ribonucleoside-diphosphate reductase class ii | SAMN04487898_1032 | Not Available | Negative | 1126812 - 1129367 | 95955.6 |
| monovalent cation:h+ antiporter, cpa1 family | SAMN04487898_1033 | Not Available | Positive | 1129706 - 1131280 | 58332.7 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04487898_1034 | Not Available | Negative | 1131292 - 1131732 | 16442.6 |
| arac-type dna-binding protein | SAMN04487898_1035 | Not Available | Positive | 1131898 - 1132347 | 17235.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04487898_1036 | Not Available | Positive | 1132412 - 1133176 | 27212.6 |
| heat repeat | SAMN04487898_1037 | Not Available | Negative | 1133251 - 1136082 | 101354.0 |
| predicted dehydrogenase | SAMN04487898_1038 | Not Available | Negative | 1136119 - 1137399 | 47944.5 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04487898_1039 | Not Available | Negative | 1137419 - 1138909 | 54972.0 |
| dihydrodipicolinate synthase/n-acetylneuraminate lyase | SAMN04487898_10310 | Not Available | Negative | 1138932 - 1140002 | 39139.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

