Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system permease protein | SAMN04487898_102427 | Not Available | Negative | 1107020 - 1109311 | 85381.2 |
| zinc protease | SAMN04487898_102428 | Not Available | Negative | 1109322 - 1112099 | 104261.0 |
| muts domain iii | SAMN04487898_102429 | Not Available | Negative | 1112089 - 1114740 | 98842.5 |
| abc-2 type transport system permease protein | SAMN04487898_102430 | Not Available | Negative | 1114742 - 1117051 | 85635.0 |
| abc-2 type transport system atp-binding protein | SAMN04487898_102431 | Not Available | Negative | 1117063 - 1117986 | 34302.8 |
| hypothetical protein | SAMN04487898_102432 | Not Available | Negative | 1118130 - 1118888 | 28273.8 |
| susd family protein | SAMN04487898_102433 | Not Available | Negative | 1118909 - 1120366 | 54386.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_102434 | Not Available | Negative | 1120378 - 1123755 | 124058.0 |
| fecr family protein | SAMN04487898_102435 | Not Available | Negative | 1124000 - 1125136 | 42094.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_102436 | Not Available | Negative | 1125212 - 1125796 | 22291.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

