Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fasciclin domain-containing protein | SAMN04487898_102417 | Not Available | Negative | 1088957 - 1089697 | 27883.6 |
| starch-binding associating with outer membrane | SAMN04487898_102418 | Not Available | Negative | 1089722 - 1091275 | 59343.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_102419 | Not Available | Negative | 1091289 - 1094516 | 118568.0 |
| protein of unknown function | SAMN04487898_102420 | Not Available | Negative | 1094513 - 1095631 | 41888.9 |
| fasciclin domain-containing protein | SAMN04487898_102421 | Not Available | Negative | 1095570 - 1096241 | 25227.1 |
| starch-binding associating with outer membrane | SAMN04487898_102422 | Not Available | Negative | 1096249 - 1097778 | 57094.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_102423 | Not Available | Negative | 1097787 - 1100768 | 111633.0 |
| signal transduction histidine kinase | SAMN04487898_102424 | Not Available | Positive | 1101259 - 1105350 | 153763.0 |
| uncharacterized conserved protein, contains gh25 family domain | SAMN04487898_102425 | Not Available | Positive | 1105479 - 1106189 | 25418.1 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04487898_102426 | Not Available | Negative | 1106250 - 1107017 | 30054.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

