Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine adenosyltransferase | SAMN04487898_102407 | Not Available | Positive | 1074102 - 1075352 | 45984.6 |
| hypothetical protein | SAMN04487898_102408 | Not Available | Positive | 1075521 - 1075862 | 13052.5 |
| hypothetical protein | SAMN04487898_102409 | Not Available | Negative | 1075883 - 1077142 | 46897.5 |
| glycosyl hydrolase family 88 | SAMN04487898_102410 | Not Available | Negative | 1077152 - 1078348 | 45046.8 |
| alpha-l-fucosidase | SAMN04487898_102411 | Not Available | Negative | 1078396 - 1079838 | 54904.3 |
| smp-30/gluconolaconase/lre-like region-containing protein | SAMN04487898_102412 | Not Available | Negative | 1080027 - 1082273 | 78891.8 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN04487898_102413 | Not Available | Negative | 1082283 - 1084037 | 64399.4 |
| peptidase m60, enhancin and enhancin-like | SAMN04487898_102414 | Not Available | Negative | 1084060 - 1085517 | 54578.2 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN04487898_102415 | Not Available | Negative | 1085530 - 1087254 | 63076.5 |
| protein of unknown function | SAMN04487898_102416 | Not Available | Negative | 1087307 - 1088908 | 57634.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

