Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN04487898_102397 | Not Available | Negative | 1064678 - 1066405 | 63855.7 |
| phosphate transport system substrate-binding protein | SAMN04487898_102398 | Not Available | Negative | 1066521 - 1067429 | 33598.7 |
| hypothetical protein | SAMN04487898_102399 | Not Available | Negative | 1067446 - 1067676 | 9012.53 |
| outer membrane transport energization protein tonb | SAMN04487898_102400 | Not Available | Negative | 1067678 - 1068499 | 29881.2 |
| outer membrane transport energization protein exbd | SAMN04487898_102401 | Not Available | Negative | 1068533 - 1069072 | 19538.7 |
| biopolymer transport protein exbd/tolr | SAMN04487898_102402 | Not Available | Negative | 1069082 - 1069699 | 22785.7 |
| outer membrane transport energization protein exbb | SAMN04487898_102403 | Not Available | Negative | 1069787 - 1070614 | 29307.1 |
| phosphoenolpyruvate carboxykinase (atp) | SAMN04487898_102404 | Not Available | Negative | 1070887 - 1072491 | 58874.0 |
| translation initiation factor 1 | SAMN04487898_102405 | Not Available | Negative | 1072636 - 1072989 | 12737.5 |
| lipid kinase, yegs/rv2252/bmru family | SAMN04487898_102406 | Not Available | Negative | 1072979 - 1073869 | 32454.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

