Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin-requiring enzyme | SAMN04487898_102377 | Not Available | Negative | 1047333 - 1047830 | 18524.6 |
| protein of unknown function | SAMN04487898_102378 | Not Available | Negative | 1047833 - 1048489 | 24656.4 |
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN04487898_102379 | Not Available | Negative | 1048486 - 1049190 | 26609.1 |
| hemolysin, contains cbs domains | SAMN04487898_102380 | Not Available | Negative | 1049201 - 1050517 | 49145.4 |
| inorganic pyrophosphatase | SAMN04487898_102381 | Not Available | Negative | 1050518 - 1051069 | 20963.2 |
| membrane-associated protein | SAMN04487898_102382 | Not Available | Negative | 1051072 - 1051734 | 25396.3 |
| nadh-quinone oxidoreductase subunit n | SAMN04487898_102383 | Not Available | Negative | 1051780 - 1053153 | 50468.1 |
| nadh-quinone oxidoreductase subunit m | SAMN04487898_102384 | Not Available | Negative | 1053158 - 1054624 | 53567.5 |
| nadh dehydrogenase subunit l | SAMN04487898_102385 | Not Available | Negative | 1054646 - 1056538 | 69021.0 |
| nadh dehydrogenase subunit k | SAMN04487898_102386 | Not Available | Negative | 1056560 - 1056889 | 12078.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

