Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | SAMN04487898_102367 | Not Available | Negative | 1036079 - 1037878 | 66919.0 |
| carboxylate-amine ligase | SAMN04487898_102368 | Not Available | Positive | 1038077 - 1039183 | 42415.8 |
| gmp synthase-glutamine amidotransferase | SAMN04487898_102369 | Not Available | Positive | 1039184 - 1040014 | 31598.4 |
| glutathionylspermidine synthase | SAMN04487898_102370 | Not Available | Positive | 1040016 - 1041203 | 45743.5 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_102371 | Not Available | Positive | 1041430 - 1042020 | 22855.9 |
| polyisoprenoid-binding protein ycei | SAMN04487898_102372 | Not Available | Positive | 1042109 - 1042639 | 19243.6 |
| hypothetical protein | SAMN04487898_102373 | Not Available | Positive | 1042689 - 1043564 | 32049.8 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN04487898_102374 | Not Available | Negative | 1043731 - 1044210 | 17341.0 |
| hypothetical protein | SAMN04487898_102375 | Not Available | Negative | 1044273 - 1045460 | 42747.7 |
| gliding motility-associated lipoprotein gldj | SAMN04487898_102376 | Not Available | Positive | 1045686 - 1047260 | 58587.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

