Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_102357 | Not Available | Negative | 1026456 - 1027076 | 23061.0 |
| hypothetical protein | SAMN04487898_102358 | Not Available | Positive | 1027136 - 1028167 | 40274.5 |
| uracil phosphoribosyltransferase | SAMN04487898_102359 | Not Available | Positive | 1028118 - 1028792 | 25084.9 |
| putative hydrolase of the had superfamily | SAMN04487898_102360 | Not Available | Positive | 1028823 - 1029512 | 26962.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_102361 | Not Available | Negative | 1029531 - 1030289 | 28904.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_102362 | Not Available | Negative | 1030286 - 1031554 | 47135.4 |
| glycosyl transferase family 2 | SAMN04487898_102363 | Not Available | Negative | 1031554 - 1032456 | 34433.1 |
| glycosyltransferase, gt2 family | SAMN04487898_102364 | Not Available | Negative | 1032516 - 1033529 | 39230.8 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04487898_102365 | Not Available | Positive | 1033638 - 1035116 | 55956.9 |
| methyltransferase, fkbm family | SAMN04487898_102366 | Not Available | Negative | 1035091 - 1035990 | 34310.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

