Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_102347 | Not Available | Negative | 1011317 - 1012297 | 38472.7 |
| conserved hypothetical protein | SAMN04487898_102348 | Not Available | Negative | 1012327 - 1013313 | 37327.9 |
| udp-2,3-diacylglucosamine pyrophosphatase lpxh | SAMN04487898_102349 | Not Available | Negative | 1013343 - 1014197 | 32917.9 |
| membrane protein yfho | SAMN04487898_102350 | Not Available | Negative | 1014656 - 1017151 | 92324.2 |
| hypothetical protein | SAMN04487898_102351 | Not Available | Negative | 1017259 - 1017507 | 9491.88 |
| conserved hypothetical protein | SAMN04487898_102352 | Not Available | Negative | 1017602 - 1017802 | 7236.73 |
| excinuclease abc subunit b | SAMN04487898_102353 | Not Available | Negative | 1017812 - 1019854 | 77919.4 |
| susd family protein | SAMN04487898_102354 | Not Available | Negative | 1020012 - 1021334 | 50194.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_102355 | Not Available | Negative | 1021353 - 1024928 | 131688.0 |
| fecr family protein | SAMN04487898_102356 | Not Available | Negative | 1025130 - 1026359 | 45353.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

