Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | SAMN04487898_102337 | Not Available | Negative | 1001547 - 1001855 | 12023.4 |
| mfs transporter, fhs family, l-fucose permease | SAMN04487898_102338 | Not Available | Negative | 1001889 - 1003136 | 44804.3 |
| glucose-1-phosphate thymidylyltransferase | SAMN04487898_102339 | Not Available | Negative | 1003516 - 1004376 | 31253.0 |
| protein of unknown function | SAMN04487898_102340 | Not Available | Negative | 1004427 - 1004990 | 20978.0 |
| protein of unknown function | SAMN04487898_102341 | Not Available | Negative | 1004995 - 1005771 | 29578.0 |
| protein of unknown function | SAMN04487898_102342 | Not Available | Negative | 1005800 - 1006315 | 19185.2 |
| peptidyl-prolyl cis-trans isomerase d | SAMN04487898_102343 | Not Available | Negative | 1006410 - 1008506 | 75805.5 |
| lipopolysaccharide-assembly, lptc-related | SAMN04487898_102344 | Not Available | Negative | 1008579 - 1009187 | 22378.9 |
| outer membrane protein transport protein (ompp1/fadl/todx) | SAMN04487898_102345 | Not Available | Negative | 1009205 - 1010527 | 48092.6 |
| type iii pantothenate kinase | SAMN04487898_102346 | Not Available | Negative | 1010490 - 1011242 | 27790.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

