Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04487898_102327 | Not Available | Negative | 989896 - 991068 | 43472.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_102328 | Not Available | Negative | 991180 - 991761 | 22477.0 |
| hypothetical protein | SAMN04487898_102329 | Not Available | Negative | 991794 - 992939 | 43682.9 |
| xaa-pro aminopeptidase | SAMN04487898_102330 | Not Available | Positive | 993196 - 994971 | 66218.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04487898_102331 | Not Available | Negative | 995263 - 996051 | 27918.3 |
| l-fuconolactonase | SAMN04487898_102332 | Not Available | Negative | 996065 - 996895 | 31396.3 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN04487898_102333 | Not Available | Negative | 996882 - 997739 | 31109.9 |
| alpha-l-fucosidase | SAMN04487898_102334 | Not Available | Negative | 997751 - 999079 | 50243.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04487898_102335 | Not Available | Negative | 999115 - 999879 | 26627.0 |
| altronate hydrolase | SAMN04487898_102336 | Not Available | Negative | 999889 - 1001547 | 60050.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

