Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,2-mannosidase, putative | SAMN04487898_102317 | Not Available | Negative | 972925 - 975222 | 86907.8 |
| serine protease do | SAMN04487898_102318 | Not Available | Negative | 975240 - 976964 | 62277.5 |
| alpha-l-fucosidase | SAMN04487898_102319 | Not Available | Negative | 976974 - 978386 | 53345.5 |
| disulphide bond corrector protein dsbc | SAMN04487898_102320 | Not Available | Negative | 978407 - 980257 | 69197.2 |
| peroxiredoxin | SAMN04487898_102321 | Not Available | Negative | 980272 - 981414 | 41721.4 |
| hypothetical protein | SAMN04487898_102322 | Not Available | Negative | 981507 - 982457 | 36163.4 |
| pkd-like family protein | SAMN04487898_102323 | Not Available | Negative | 982472 - 983893 | 52698.7 |
| protein of unknown function | SAMN04487898_102324 | Not Available | Negative | 983915 - 984745 | 31419.6 |
| susd family protein | SAMN04487898_102325 | Not Available | Negative | 984756 - 986228 | 56031.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_102326 | Not Available | Negative | 986279 - 989713 | 127791.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

