Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_102307 | Not Available | Negative | 953800 - 956865 | 112998.0 |
| hypothetical protein | SAMN04487898_102308 | Not Available | Negative | 956909 - 959329 | 92119.4 |
| two component regulator propeller | SAMN04487898_102309 | Not Available | Negative | 959413 - 963543 | 156370.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_102310 | Not Available | Negative | 963609 - 965525 | 71318.4 |
| susd family protein | SAMN04487898_102311 | Not Available | Negative | 965537 - 966982 | 53546.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_102312 | Not Available | Negative | 966994 - 970305 | 120580.0 |
| fecr family protein | SAMN04487898_102313 | Not Available | Negative | 970452 - 971450 | 37169.7 |
| hypothetical protein | SAMN04487898_102314 | Not Available | Positive | 971631 - 971870 | 9437.25 |
| plasmid stabilization system protein pare | SAMN04487898_102315 | Not Available | Positive | 971870 - 972169 | 11921.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_102316 | Not Available | Negative | 972173 - 972754 | 22063.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

