Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bclb c-terminal domain-containing protein | SAMN04487898_102297 | Not Available | Positive | 939012 - 940223 | 40718.4 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04487898_102298 | Not Available | Positive | 940255 - 945114 | 165089.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04487898_102299 | Not Available | Positive | 945144 - 946031 | 32274.5 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_102300 | Not Available | Negative | 946053 - 947045 | 37933.9 |
| hypothetical protein | SAMN04487898_102301 | Not Available | Positive | 947206 - 947724 | 19036.7 |
| protein of unknown function | SAMN04487898_102302 | Not Available | Positive | 947809 - 948132 | 11760.9 |
| hypothetical protein | SAMN04487898_102303 | Not Available | Negative | 948136 - 949863 | 63966.2 |
| mfs transporter, yqge family, putative transporter | SAMN04487898_102304 | Not Available | Negative | 949847 - 951127 | 47488.6 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN04487898_102305 | Not Available | Negative | 951120 - 952175 | 39125.5 |
| starch-binding associating with outer membrane | SAMN04487898_102306 | Not Available | Negative | 952294 - 953775 | 55189.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

