Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN04487898_102277 | Not Available | Negative | 917027 - 918334 | 48010.5 |
| spore coat polysaccharide biosynthesis protein spsf | SAMN04487898_102278 | Not Available | Negative | 918338 - 919099 | 28931.5 |
| predicted oxidoreductase | SAMN04487898_102279 | Not Available | Negative | 919087 - 919962 | 33237.9 |
| methyltransferase domain-containing protein | SAMN04487898_102280 | Not Available | Negative | 919946 - 920620 | 25889.4 |
| hypothetical protein | SAMN04487898_102281 | Not Available | Negative | 920610 - 921803 | 44786.1 |
| udp-n-acetylglucosamine 4,6-dehydratase (inverting) | SAMN04487898_102282 | Not Available | Negative | 921803 - 922819 | 37855.5 |
| chain length determinant protein | SAMN04487898_102283 | Not Available | Negative | 922819 - 923922 | 40939.2 |
| protein involved in polysaccharide export, contains slbb domain of the beta-grasp fold | SAMN04487898_102284 | Not Available | Negative | 923949 - 926423 | 90425.2 |
| hypothetical protein | SAMN04487898_102285 | Not Available | Negative | 926619 - 927314 | 25811.0 |
| coenzyme pqq synthesis protein d (pqqd) | SAMN04487898_102286 | Not Available | Positive | 927482 - 927820 | 13279.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

