Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN04487898_102267 | Not Available | Negative | 906711 - 907535 | 31808.1 |
| gdpmannose 4,6-dehydratase | SAMN04487898_102268 | Not Available | Negative | 907510 - 908472 | 35900.1 |
| oligosaccharide repeat unit polymerase | SAMN04487898_102269 | Not Available | Negative | 908478 - 909896 | 53509.3 |
| hypothetical protein | SAMN04487898_102270 | Not Available | Negative | 909901 - 911196 | 50010.0 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04487898_102271 | Not Available | Negative | 911198 - 912628 | 54342.8 |
| maltose o-acetyltransferase | SAMN04487898_102272 | Not Available | Negative | 912621 - 913130 | 19222.1 |
| n-acetylneuraminate synthase | SAMN04487898_102273 | Not Available | Negative | 913179 - 914219 | 38581.1 |
| n-acetylglucosaminyl deacetylase, lmbe family | SAMN04487898_102274 | Not Available | Negative | 914223 - 914933 | 27023.3 |
| methionyl-trna formyltransferase | SAMN04487898_102275 | Not Available | Negative | 914911 - 915582 | 25754.5 |
| udp-2,4-diacetamido-2,4, 6-trideoxy-beta-l-altropyranose hydrolase | SAMN04487898_102276 | Not Available | Negative | 915582 - 917021 | 54342.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

